Code
NTG-PTPX-02CX
Profile
Active-Compendium
81457x1, 88377x2, 88360x2, 88342x1; add 88374x1 if HER2 IHC is reflexed to FISH; add 81479x1 if reflexed to NTRK NGS Fusion Panel (default) or 88374x3 automated (88377x3 manual) if reflexed to NTRK 1-3 FISH Panel
81479
Clinical
Oncology,Pathology
FFPE tissue: Paraffin block preferred. Please use 10% buffered formalin fixative. Do not use zinc fixatives.
Flag Active
True
Orderable Test Description
<p>The NeoTYPE Pancreas Tumor Profile analyzes 69 biomarkers through a combination of next-generation sequencing (NGS), FISH, and IHC as listed below. Test orders include summary interpretation of all results to help guide treatment decisions. If global HER2 (Other) IHC w/Breast Scoring result is 2+, case will reflex to global HER2 (Other) FISH w/Breast Scoring unless reflex to tech-only FISH or reflex opt-out is requested. If Pan-TRK IHC is expressed or equivocal, reflex to either NTRK NGS Fusion Panel (Default) or NTRK 1-3 FISH Panel will be added. A microsatellite instability (MSI) NGS result of "indeterminate" will create a reflex to MSI by PCR as long as the tumor percentage is ≥40% and paired normal tissue is available. NGS (63 genes + 2 biomarkers): ACVR1B, ARID1A, ATM, ATR, BARD1, BRAF, BRCA1, BRCA2, BRIP1, CDK12, CDKN2A, CDKN2B, CHEK1, CHEK2, EGFR, ERBB2, ERBB4, FANCA, FANCC, FANCD2, FANCE, FANCF, FANCG, FANCL, FGFR1, FGFR2, FGFR3, FGFR4, GNAS, HRAS, IDH1, IDH2, KIT, KRAS, MEN1, MET, Microsatellite Instability (MSI), MLH1, MRE11A (MRE11), MSH2, MSH6, , NBN, NF1, NOTCH1, NRAS, PALB2, PBRM1, PIK3CA, PMS2, PTEN, RAD50, RAD51, RAD51B, RAD51C, RAD51D, RAD54L, RNF43, SMAD4, SMO, STK11, TGFBR2, TERT Promoter, TP53, Tumor Mutation Burden (TMB), VHL FISH (2 FISH): MET, PTEN (tech-only available) IHC (3 biomarkers): HER2 (Other) IHC w/Breast Scoring, PD-L1 LDT, Pan-TRK (tech-only available for HER2 and PD-L1).</p>
Orderable Turn Around Time
14 Days
Orderable Biomarkers
NY Approved
True
Orderable Biomarkers JSON
{"DNA Sequencing": {"SNVs + Indels": ["MDM2", "MEN1", "NF1", "TGFBR2", "VHL", "CDKN2A", "FGFR2", "FGFR3", "TP53", "BRAF", "HRAS", "IDH1", "IDH2", "KIT", "KRAS", "NRAS", "BRCA2", "BRIP1", "PALB2", "RAD51C", "TERT", "FUS", "HMGA2", "PLAG1", "ARID1A", "ATM", "ATR", "BARD1", "BRCA1", "CDK12", "CHEK1", "CHEK2", "EGFR", "ERBB2", "ERBB4", "FANCA", "FANCC", "FANCD2", "EWSR1", "FANCF", "FANCE", "FANCL", "FGFR1", "FANCG", "MET", "MLH1", "MRE11", "MSH2", "MSH6", "NBN", "PIK3CA", "PMS2", "PTEN", "RAD50", "RAD51", "RAD51B", "RAD51D", "RAD54L", "SMAD4", "SMO", "PBRM1", "NOTCH1", "RNF43", "STK11", "ACVR1B", "CDKN2B", "FGFR4", "GNAS"], "CNVs": ["MET", "PTEN"], "Genomic Signatures": ["MSI", "TMB"]}, "Immunohistochemistry (IHC)": {"Expression": ["NTRK1", "NTRK2", "NTRK3", "HER2", "PD-L1"]}, "Fluorescence In Situ Hybridization (FISH)": {"Amplification(s)": ["HER2"]}}
Keywords string
precision profile, solid tumors, neo type, NeoTYPE Precision Profile for Solid Tumors. NeoTYPE® Pancreas Tumor Profile
Title URL
neotype-pancreas-tumor-profile
TAT Details
NGS: 14 Days
FISH: 7 Days
IHC: Global: 2 Days
Tech-Only (stain
only): 24 Hours
Potential Reflex Testing (Additional Time):
MSI by PCR: 5 Days
HER2 FISH: 5 Days
NTRK 1-3 FISH: 5 Days
NTRK NGS: 1-3 Days
Storage and transportation
Use cold pack for transport, making sure cold pack is not in direct contact with specimen. NYS clients please provide date and time of Collection.